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immunarch 0.10.0

Immunarch v1.0
- Installation & troubleshooting
- First steps
- Data loading
- How-to: Loading MiXCR Data
- How-to: Loading 10x Genomics Data
- How-to: Single-cell and paired chain data
- Basic statistics and clonality
- Data filtering
- Repertoire-level exploration and comparison
- Repertoire overlap and public clonotypes
- Gene usage
- Diversity estimation
- Clonotype-level exploration and comparison
- Track clonotypes across samples and time
- Annotate clonotypes using immune receptor databases
- Kmer and sequence motif analysis and visualisation
- Preparing to publication
- Make your plots publication-ready with fixVis
- BCR analysis
- BCR pipeline
- Clustering
Reference

Gene segments table

Source: R/v0_data_docs.R

gene_segments.Rd

Gene segments table

Developed by Vadim I. Nazarov, Vasily O. Tsvetkov, Aleksandr A. Popov, Ivan Balashov.

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