WIP

gene_stats()

Value

gene_stats returns all segment gene statistics

Examples

gene_stats()
#> alias species ighd ighj ighv igij igkj igkv iglj iglv traj #> 1 bt BosTaurus 21 4 25 0 1 6 5 26 46 #> 2 cd CamelusDromedarius 0 0 0 0 0 0 0 0 0 #> 3 clf CanisLupusFamiliaris 0 0 0 0 0 0 0 0 0 #> 4 dr DanioRerio 7 7 0 3 0 0 0 0 0 #> 5 hs HomoSapiens 30 13 248 0 5 64 7 69 57 #> 6 macmul MacacaMulatta 24 7 19 0 4 83 5 0 0 #> 7 mmc MusMusculusCastaneus 0 0 0 0 0 4 0 0 0 #> 8 mmd MusMusculusDomesticus 0 0 0 0 0 2 0 0 0 #> 9 musmus MusMusculus 32 8 225 0 8 109 3 5 42 #> 10 oa OrnithorhynchusAnatinus 3 10 0 0 0 0 0 0 0 #> 11 oc OryctolagusCuniculus 10 11 39 0 8 26 2 20 0 #> 12 om OncorhynchusMykiss 9 7 6 0 0 0 0 0 0 #> 13 rn RattusNorvegicus 30 4 113 0 6 132 2 8 0 #> 14 smth MusMusculusMolossinus 0 0 0 0 0 1 0 0 0 #> 15 smth MusMusculusMusculus 0 0 0 0 0 1 0 0 0 #> 16 smth MusSpretus 0 0 0 0 0 2 0 2 0 #> 17 ss SusScrofa 5 5 15 0 8 19 4 14 0 #> trav trbd trbj trbv trdd trdj trdv trgj trgv #> 1 0 0 0 0 5 3 0 6 15 #> 2 0 0 0 0 0 0 7 2 2 #> 3 0 2 8 19 0 0 0 7 8 #> 4 0 0 0 0 0 0 0 0 0 #> 5 60 3 14 64 3 4 6 4 10 #> 6 0 2 15 58 0 0 0 0 0 #> 7 0 0 0 0 0 0 0 0 0 #> 8 0 0 0 0 0 0 0 0 0 #> 9 145 2 14 23 2 3 7 0 11 #> 10 0 0 0 0 0 0 0 0 0 #> 11 0 0 0 0 0 0 0 0 0 #> 12 0 1 9 0 0 0 0 0 0 #> 13 0 0 0 0 0 0 0 0 0 #> 14 0 0 0 0 0 0 0 0 0 #> 15 0 0 0 0 0 0 0 0 0 #> 16 0 0 0 0 0 0 0 0 0 #> 17 0 0 0 0 0 0 0 0 0
get_genes("hs.trbv", "segment")
#> [1] "TRBV10-1" "TRBV10-2" "TRBV10-3" "TRBV11-1" "TRBV11-2" "TRBV11-3" #> [7] "TRBV12-3" "TRBV12-4" "TRBV12-5" "TRBV13" "TRBV14" "TRBV15" #> [13] "TRBV16" "TRBV18" "TRBV19" "TRBV2" "TRBV20-1" "TRBV24-1" #> [19] "TRBV25-1" "TRBV27" "TRBV28" "TRBV29-1" "TRBV3-1" "TRBV30" #> [25] "TRBV4-1" "TRBV4-2" "TRBV4-3" "TRBV5-1" "TRBV5-4" "TRBV5-5" #> [31] "TRBV5-6" "TRBV5-8" "TRBV6-1" "TRBV6-2" "TRBV6-3" "TRBV6-4" #> [37] "TRBV6-5" "TRBV6-6" "TRBV6-8" "TRBV6-9" "TRBV7-2" "TRBV7-3" #> [43] "TRBV7-4" "TRBV7-6" "TRBV7-7" "TRBV7-8" "TRBV7-9" "TRBV9"